Publications

Overview

All VPR publications can be found below ordered by year of publication. You may sort by type of publication, keywords, associated research project or search by abstract, title or author.

2012

Modelling cell function

Bassingthwaighte JB, Boyle C, Pichardo C, Diaz V

Personalized Computational Biomedicine: A Guide to the Virtual Physiological Human pp 001-0NN, edited by Coveney P and Noble D. London, UK: Royal Society of London, 2012.

An atlas-based geometry pipeline for cardiac hermite model construction and diffusion tensor reorientation

Zhang Y, Liang X, Ma J, Jing Y, Gonzales MJ, Villongco C, Krishnamurthy A, Frank LR, Nigam V, Stark P, Narayan SM, McCulloch AD

Med Imag Anal 16: 1130-41, 2012. PMID: 22841777, PMCID: PMC3443263

Increase of sodium delivery stimulates the mitochondrial respiratory chain H2O2 production in rat renal medullary thick ascending limb

Ohsaki Y, O’Connor P, Mori T, Ryan RP, Dickinson BC, Chang CJ, Lu Y, Ito S, Cowley AW Jr

Am J Physiol Renal Physiol. 302:F95-F102. 2012 PMCID: PMC3251339

Compartmental modeling in the analysis of biological systems

Bassingthwaighte JB, Butterworth E, Jardine B, Raymond G

Computational Toxicology: Volume 1 929: 391-438, edited by Brad Reisfeld and Arthur N Mayeno. Methods in Molecular Biology, 2012.

Global sensitivity and identifiably analysis applied to a model predicting baroreflex regulation during head-up tilt

Olsen CH, Mehlsen J, Ottesen JT, Tran HT, Olufsen MS

Proc The 1st international workshop on innovative simulation for healthcare, I-WISH. W. Backfrieder, A. Bruzzone, F. Longo, V. Novak, J. Rosen (eds), Rende (CS), Italy, 81-6, 2012.

Comparison of the Gibbs and Suga Formulations of Cardiac Energetics: the Demise of “Isoefficiency”

Han JC, Taberner AJ, Tran K, Goo S, Nickerson DP, Nash MP, Nielsen PMF, Crampin EJ, Loiselle DS.

Journal of Applied Physiology 996–1003, 2012. PMID: 22879535. PMCID: PMC3487497

Patient specific parameter estimation and heart rate regulation

Olufsen MS, Ottesen JT

J Math Biol. 23:1350078, 2012.

Simulation of rarefaction: impact on blood pressure in the systemic and pulmonary large and small arteries.

Olufsen MS, Hill NA, Vaughan GA, Sainsbury C, Johnson M

J Fluid Mech. 705: 280-305, 2012. PMID: 22962497 PMCID: PMC3433075

Modeling to link regional myocardial work, metabolism, and blood flows

Bassingthwaighte JB, Beard DA, Carlson BE, RK Dash, KC Vinnakota

Ann Biomed Eng. 40(11): 2379-98. PMCID: PMC3471663